ProcessMCMCModule.hpp

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//MaCh3 includes
#pragma once
// yaml Includes
#include "yaml-cpp/yaml.h"
#include "Fitters/MCMCProcessor.h"
#include "CLI/API/plugin.hpp"
 
namespace M3{
 
 
  class ProcessMCMCModule: public IModuleBase{
 
    public:
      virtual ~ProcessMCMCModule();
 
      MaCh3ArgumentParser* get_parser() override;
 
      int Run() override;
 
 
    private:
      std::map<std::string, std::pair<double, double>> GetCustomBinning(const YAML::Node& Settings);
 
      void ProcessMCMC(const std::string& inputFile);
 
      void MultipleProcessMCMC();
 
      void CalcBayesFactor(MCMCProcessor* Processor);
 
      void CalcSavageDickey(MCMCProcessor* Processor);
 
      void CalcParameterEvolution(MCMCProcessor* Processor);
 
      void CalcBipolarPlot(MCMCProcessor* Processor);
 
      void GetTrianglePlot(MCMCProcessor* Processor);
 
      void DiagnoseCovarianceMatrix(MCMCProcessor* Processor, const std::string& inputFile);
 
      TH2D* TMatrixIntoTH2D(TMatrixDSym* Matrix, const std::string& title);
 
      void KolmogorovSmirnovTest(const std::vector<std::unique_ptr<MCMCProcessor>>& Processor,
                                 const std::unique_ptr<TCanvas>& Posterior,
                                 const TString& canvasname);
 
      int nFiles;                                
      std::vector <std::string> FileNames;       
      std::vector <std::string> TitleNames;      
      std::string config;                        
  };
}