Diagnostics Directory Reference

Directory dependency graph for Diagnostics:

Files
file	CombineMaCh3Chains.cpp [code]
	Combine chains files produced by MCMC, enforcing the condition that all the files to combine were made using the exact same software versions and config files.
file	DiagMCMC.cpp [code]
file	GetPenaltyTerm.cpp [code]
	KS: This file contains the implementation of the function to extract specific penalty terms from systematic chains.
file	PlotMCMCDiag.cpp [code]
	KS: This script is used to analyse output form DiagMCMC.
file	ProcessMCMC.cpp [code]
	Main exectable responsible for different types of MCMC processing like drawing posteriors, triangle plots etc. Actual implantation of methods is in MCMCProcessor.
file	RHat.cpp [code]
	This executable calculates the \( \hat{R} \) estimator for Markov Chain Monte Carlo (MCMC) convergence.
file	RHat_HighMem.cpp [code]