GetPostfitParamPlots.cpp File Reference

#include <iostream>
#include <sstream>
#include <iomanip>
#include <algorithm>
#include "PlottingUtils/PlottingUtils.h"
#include "PlottingUtils/PlottingManager.h"
#include "TROOT.h"
#include "TGaxis.h"
#include "TString.h"
#include "TStyle.h"
#include "TH1.h"
#include "TH2.h"
#include "TF1.h"
#include "TLegend.h"
#include "TPad.h"
#include "TCanvas.h"
#include "TTree.h"
#include "TFile.h"
#include "TVectorD.h"
#include "TCandle.h"
#include "TFrame.h"
#include "TGraphAsymmErrors.h"

Include dependency graph for GetPostfitParamPlots.cpp:

Go to the source code of this file.

Functions
void	copyParToBlockHist (const int localBin, const std::string &paramName, TH1D *blockHist, const std::string &type, const int fileId, const bool setLabels=true)
void	InitializePads (const TCanvas *canvas, TPad *&pad3, TPad *&pad4)
void	CopyViolinToBlock (TH2D *FullViolin, TH2D *ReducedViolin, const std::vector< std::string > &ParamNames)
template<typename HistType >
void	PrettifyTitles (HistType *hist)
bool	ReadSettings (const std::shared_ptr< TFile > &File1)
std::unique_ptr< TH1D >	makeRatio (TH1D *PrefitCopy, TH1D *PostfitCopy, bool setAxes)
bool	IsInvalidHist (const TH1D *hist, double invalid=M3::_BAD_DOUBLE_)
void	DrawPlots (TCanvas *plotCanv, TH1D *PrefitCopy, const std::vector< std::unique_ptr< TH1D >> &PostfitVec, TPad *mainPad, TPad *ratioPad, const std::string &OutName)
void	MakeParameterPlots (TCanvas *canv)
void	MakeFluxPlots (TCanvas *canv)
void	MakeNDDetPlots ()
void	MakeRidgePlots ()
void	GetPostfitParamPlots ()
std::unique_ptr< TGraphAsymmErrors >	MakeTGraphAsymmErrors (const std::shared_ptr< TFile > &File, std::vector< int > Index={})
void	GetViolinPlots ()
	KS: Make fancy violin plots. More...
void	Get2DComparison (const std::string &FileName1, const std::string &FileName2)
	KS: Make comparison of 2D Posteriors. More...
int	main (int argc, char *argv[])

Variables
MaCh3Plotting::PlottingManager *	PlotMan
int	NDParameters
int	NDParametersStartingPos
std::vector< int >	NDSamplesBins
std::vector< std::string >	NDSamplesNames
std::string	SaveName
std::string	plotType

Detailed Description

This script generates post-fit parameter plots. The central postfit value is taken as the Highest Posterior Density (HPD), but can be easily changed to another method such as Gaussian. Be cautious as parameter names and the number of parameters per plot are currently hardcoded.

Usage:

./GetPostfitParamPlots ProcessMCMC_Output1.root <ProcessMCMC_Output2.root> <ProcessMCMC_Output3.root>

Author

Clarence Wret

Will Parker

Kamil Skwarczynski

Ewan Miller

Definition in file GetPostfitParamPlots.cpp.

Function Documentation

copyParToBlockHist()

void copyParToBlockHist	(	const int	localBin,
		const std::string &	paramName,
		TH1D *	blockHist,
		const std::string &	type,
		const int	fileId,
		const bool	setLabels = true
	)

Definition at line 62 of file GetPostfitParamPlots.cpp.

                                                                                             {
  // Set the values in the sub-histograms
  MACH3LOG_DEBUG("copying data from at local bin {}: for parameter {}", localBin, paramName);
  MACH3LOG_DEBUG("  Fitter specific name: {}", PlotMan->input().translateName(fileId, MaCh3Plotting::kPostFit, paramName));
  MACH3LOG_DEBUG("  value: {:.4f}", PlotMan->input().getPostFitValue(fileId, paramName, type));
  MACH3LOG_DEBUG("  error: {:.4f}", PlotMan->input().getPostFitError(fileId, paramName, type));
 
  blockHist->SetBinContent(localBin +1, PlotMan->input().getPostFitValue(fileId, paramName, type));
  blockHist->SetBinError(localBin +1, PlotMan->input().getPostFitError(fileId, paramName, type));
 
  if(setLabels){
    blockHist->GetXaxis()->SetBinLabel(localBin +1, paramName.c_str());
    blockHist->GetXaxis()->LabelsOption("v");
  }
}

CopyViolinToBlock()

void CopyViolinToBlock	(	TH2D *	FullViolin,
		TH2D *	ReducedViolin,
		const std::vector< std::string > &	ParamNames
	)

Definition at line 97 of file GetPostfitParamPlots.cpp.

                                                                                                      {
  for(unsigned int i = 0; i < ParamNames.size(); i++)
  {
    int ParamBinId = M3::_BAD_INT_;
    for (int ix = 0; ix < FullViolin->GetXaxis()->GetNbins(); ++ix) {
      if(FullViolin->GetXaxis()->GetBinLabel(ix+1) == ParamNames[i])
      {
        ParamBinId = ix+1;
        break;
      }
    }
    if(ParamBinId == M3::_BAD_INT_) {
      MACH3LOG_WARN("Didn't find param {}", ParamNames[i]);
      continue;
    }
    //KS Fill content of reduced violin
    for (int iy = 0; iy < FullViolin->GetYaxis()->GetNbins(); ++iy) {
      ReducedViolin->SetBinContent(i+1, iy+1, FullViolin->GetBinContent(ParamBinId, iy+1));
      ReducedViolin->GetXaxis()->SetBinLabel(i+1, ParamNames[i].c_str());
    }
  }
  ReducedViolin->SetFillColor(FullViolin->GetFillColor());
  ReducedViolin->SetFillColorAlpha(FullViolin->GetMarkerColor(), 0.35);
  ReducedViolin->SetLineColor(FullViolin->GetMarkerColor());
 
  ReducedViolin->SetMarkerColor(FullViolin->GetMarkerColor());
  ReducedViolin->SetMarkerStyle(FullViolin->GetMarkerStyle());
  ReducedViolin->SetMarkerSize(FullViolin->GetMarkerSize());
 
  ReducedViolin->GetYaxis()->SetTitleOffset(FullViolin->GetTitleOffset());
  ReducedViolin->GetYaxis()->SetTitle(FullViolin->GetYaxis()->GetTitle());
  ReducedViolin->GetXaxis()->LabelsOption("v");
}

DrawPlots()

void DrawPlots	(	TCanvas *	plotCanv,
		TH1D *	PrefitCopy,
		const std::vector< std::unique_ptr< TH1D >> &	PostfitVec,
		TPad *	mainPad,
		TPad *	ratioPad,
		const std::string &	OutName
	)

Definition at line 259 of file GetPostfitParamPlots.cpp.

                                                                        {
  // KS: If plot is invalid for some reason simply do not plot
  if(IsInvalidHist(PrefitCopy)) return;
 
  // Draw!
  plotCanv->cd();
  mainPad->Draw();
  mainPad->cd();
  PrefitCopy->GetYaxis()->SetTitle("Parameter Value");
  
  PrefitCopy->GetYaxis()->SetLabelSize(0.);
  PrefitCopy->GetYaxis()->SetTitleSize(0.05);
  PrefitCopy->GetYaxis()->SetTitleOffset(1.3);
  PrefitCopy->Draw("e2");
 
  for (int fileId = 0; fileId < static_cast<int>(PostfitVec.size()); fileId++) {
    TH1D *postFitHist = PostfitVec[fileId].get();
    
    postFitHist->SetMarkerColor(TColor::GetColorPalette(fileId));
    postFitHist->SetLineColor(TColor::GetColorPalette(fileId));
    postFitHist->SetMarkerStyle(7);
    postFitHist->SetLineStyle(1+fileId);
    postFitHist->SetLineWidth(PlotMan->getOption<int>("plotLineWidth"));
 
    postFitHist->Draw("e1, same");
  }
  
  plotCanv->Update();
  auto axis = std::make_unique<TGaxis>(PrefitCopy->GetXaxis()->GetBinLowEdge(PrefitCopy->GetXaxis()->GetFirst()), gPad->GetUymin()+0.01,
                            PrefitCopy->GetXaxis()->GetBinLowEdge(PrefitCopy->GetXaxis()->GetFirst()), gPad->GetUymax(),
                            gPad->GetUymin()+0.01, gPad->GetUymax(), 510, "");
  axis->SetLabelFont(43);
  axis->SetLabelSize(25);
  axis->Draw();
 
  plotCanv->cd();
  ratioPad->Draw();
  ratioPad->cd();
  
  std::vector<std::unique_ptr<TH1D>> ratioHists;
  // save pointers to these so we can delete them once we are done
  ratioHists.push_back(makeRatio(PrefitCopy, PostfitVec[0].get(), true));
 
  ratioHists[0]->Draw("p");
  for(int postFitIdx = 1; postFitIdx < static_cast<int>(PostfitVec.size()); postFitIdx++){
    ratioHists.push_back(makeRatio(PrefitCopy, PostfitVec[postFitIdx].get(), true));
    
    ratioHists[postFitIdx]->SetMarkerColor(TColor::GetColorPalette(postFitIdx));
    ratioHists[postFitIdx]->SetLineColor(TColor::GetColorPalette(postFitIdx));
    ratioHists[postFitIdx]->SetMarkerStyle(7);
    ratioHists[postFitIdx]->SetLineStyle(1+postFitIdx);
    ratioHists[postFitIdx]->SetLineWidth(PlotMan->getOption<int>("plotLineWidth"));
 
    ratioHists[postFitIdx]->Draw("p same");
  }
 
  // draw lines across the plot at +-1 and 0
  TLine line(ratioHists[0]->GetXaxis()->GetBinLowEdge(ratioHists[0]->GetXaxis()->GetFirst()), 0.0, ratioHists[0]->GetXaxis()->GetBinLowEdge(ratioHists[0]->GetXaxis()->GetLast()+1), 0.0);
  TLine line2(ratioHists[0]->GetXaxis()->GetBinLowEdge(ratioHists[0]->GetXaxis()->GetFirst()), 1.0, ratioHists[0]->GetXaxis()->GetBinLowEdge(ratioHists[0]->GetXaxis()->GetLast()+1), 1.0);
  TLine line3(ratioHists[0]->GetXaxis()->GetBinLowEdge(ratioHists[0]->GetXaxis()->GetFirst()), -1.0, ratioHists[0]->GetXaxis()->GetBinLowEdge(ratioHists[0]->GetXaxis()->GetLast()+1), -1.0);
  
  line.SetLineColor(kRed);
  line.SetLineStyle(kDashed);
  line.SetLineWidth(PlotMan->getOption<int>("refLineWidth"));
  line2.SetLineColor(kRed);
  line2.SetLineStyle(kDashed);
  line2.SetLineWidth(PlotMan->getOption<int>("refLineWidth"));
  line3.SetLineColor(kRed);
  line3.SetLineStyle(kDashed);
  line3.SetLineWidth(PlotMan->getOption<int>("refLineWidth"));
 
  line.Draw("same");
  line2.Draw("same");
  line3.Draw("same");
 
  plotCanv->Print((OutName).c_str());
}

Get2DComparison()

void Get2DComparison	(	const std::string &	FileName1,
		const std::string &	FileName2
	)

KS: Make comparison of 2D Posteriors.

Definition at line 992 of file GetPostfitParamPlots.cpp.

{
  auto canvas = std::make_unique<TCanvas>("canvas", "canvas", 0, 0, 1024, 1024);
  canvas->SetBottomMargin(0.1f);
  canvas->SetTopMargin(0.05f);
  canvas->SetRightMargin(0.03f);
  canvas->SetLeftMargin(0.15f);
 
  // Open the two ROOT files
  TFile* File1 = M3::Open(FileName1, "READ", __FILE__, __LINE__);
  TFile* File2 = M3::Open(FileName2, "READ", __FILE__, __LINE__);
 
  // Get the Post_2d_hists directory from both files
  TDirectory* Dir1 = File1->Get<TDirectory>("Post_2d_hists");
  TDirectory* Dir2 = File2->Get<TDirectory>("Post_2d_hists");
 
  if (!Dir1 || !Dir2) {
    MACH3LOG_WARN("Post_2d_hists directory not found in one or both files while running {}.", __func__);
    File1->Close();
    delete File1;
    File2->Close();
    delete File2;
    return;
  }
 
  // Get the list of keys in the first directory
  TIter next1(Dir1->GetListOfKeys());
  TKey* key1 = nullptr;
 
  // Prepare the output PDF filename
  std::string SaveName2D = "2DComparison_" + FileName1 + "_" + FileName2;
  SaveName2D = SaveName2D.substr(0, SaveName2D.find(".root"));
  SaveName2D = SaveName2D + ".pdf";
 
  canvas->Print((SaveName2D+"[").c_str());
  // Loop over keys in the first directory
  while ((key1 = static_cast<TKey*>(next1()))) {
    TString histName = key1->GetName();
 
    // Check if the key is a TH2D
    if (TString(key1->GetClassName()) == "TH2D") {
      TH2D* hist1 = static_cast<TH2D*>(key1->ReadObj());
 
      // Try to get the histogram with the same name from the second directory
      TH2D* hist2 = static_cast<TH2D*>(Dir2->Get(histName));
 
      if (hist2) {
        hist1->SetTitle("");
        hist1->SetTitle("");
 
        // Prettify axis titles
        std::string Xtitle = PlotMan->style().prettifyParamName(hist1->GetXaxis()->GetTitle());
        std::string Ytitle = PlotMan->style().prettifyParamName(hist1->GetYaxis()->GetTitle());
 
        // Adjust the axis ranges of hist1 to include both histograms
        double xmin = std::min(hist1->GetXaxis()->GetXmin(), hist2->GetXaxis()->GetXmin());
        double xmax = std::max(hist1->GetXaxis()->GetXmax(), hist2->GetXaxis()->GetXmax());
        double ymin = std::min(hist1->GetYaxis()->GetXmin(), hist2->GetYaxis()->GetXmin());
        double ymax = std::max(hist1->GetYaxis()->GetXmax(), hist2->GetYaxis()->GetXmax());
 
        hist1->GetXaxis()->SetRangeUser(xmin, xmax);
        hist1->GetYaxis()->SetRangeUser(ymin, ymax);
 
        hist1->GetXaxis()->SetTitle(Xtitle.c_str());
        hist1->GetYaxis()->SetTitle(Ytitle.c_str());
 
        hist1->SetLineColor(kBlue);
        hist1->SetLineStyle(kSolid);
        hist1->SetLineWidth(2);
 
        hist2->SetLineColor(kRed);
        hist2->SetLineStyle(kDashed);
        hist2->SetLineWidth(2);
 
        hist1->Draw("CONT3");
        hist2->Draw("CONT3 SAME");
 
        auto Legend = std::make_unique<TLegend>(0.20, 0.7, 0.4, 0.92);
        Legend->AddEntry(hist1, PlotMan->getFileLabel(0).c_str(), "l");
        Legend->AddEntry(hist2, PlotMan->getFileLabel(1).c_str(), "l");
        Legend->SetTextSize(0.03);
        Legend->SetLineColor(0);
        Legend->SetLineStyle(0);
        Legend->SetFillColor(0);
        Legend->SetFillStyle(0);
        Legend->SetBorderSize(0);
        Legend->Draw("SAME");
        canvas->Print((SaveName2D).c_str());
      }
    }
  }
  canvas->Print((SaveName2D+"]").c_str());
 
  File1->Close();
  delete File1;
  File2->Close();
  delete File2;
}

GetPostfitParamPlots()

void GetPostfitParamPlots

(

)

Definition at line 725 of file GetPostfitParamPlots.cpp.

{
  SaveName = PlotMan->getOutputName();
  
  //KS: By default we take HPD values, but by changing "plotType" you can use for example Gauss
  plotType = "HPD";
  //plotType = "gaus"; 
    
  MACH3LOG_INFO("Plotting {} errors", plotType);
  
  // if we have one MaCh3 nd file then we can get settings from it 
  bool plotNDDet = false;
  for (size_t fileId = 0; fileId < PlotMan->input().getNInputFiles(); fileId++) {
    if(!ReadSettings(PlotMan->input().getFile(0).file)) {
      MACH3LOG_INFO("at least one file provided does not have 'settings' tree indicating it is not MaCh3 ND file");
      MACH3LOG_INFO("  sadly this means I cannot plot ND Det parameters as this is only supported for MaCh3 ND files for now... sorry :(");
      plotNDDet = false;
    }
  }
 
  auto canv = std::make_unique<TCanvas>("canv", "canv", 1024, 1024);
  //gStyle->SetPalette(51);
  gStyle->SetOptStat(0); //Set 0 to disable statistic box
  canv->SetLeftMargin(0.12);
  canv->SetBottomMargin(0.12);
  canv->SetTopMargin(0.08);
  canv->SetRightMargin(0.04);
  canv->Print((SaveName+"[").c_str());
 
  // Make a Legend page
  auto leg = std::make_unique<TLegend>(0.0, 0.0, 1.0, 1.0);
  // make a dummy TH1 to set out legend
  auto Prefit = std::make_unique<TH1D>();
  Prefit->SetDirectory(nullptr);
  PlotMan->style().setTH1Style(Prefit.get(), PlotMan->getOption<std::string>("prefitHistStyle"));
  leg->AddEntry(Prefit.get(), "Prior", "lpf");
 
  std::vector<std::unique_ptr<TH1D>> postFitHist_tmp(PlotMan->getNFiles());
  for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++){
    postFitHist_tmp[fileId] = std::make_unique<TH1D>();
    postFitHist_tmp[fileId]->SetDirectory(nullptr);
    
    postFitHist_tmp[fileId]->SetMarkerColor(TColor::GetColorPalette(fileId));
    postFitHist_tmp[fileId]->SetLineColor(TColor::GetColorPalette(fileId));
    postFitHist_tmp[fileId]->SetMarkerStyle(7);
    postFitHist_tmp[fileId]->SetLineStyle(1+fileId);
    postFitHist_tmp[fileId]->SetLineWidth(PlotMan->getOption<int>("plotLineWidth"));
    leg->AddEntry(postFitHist_tmp[fileId].get(), PlotMan->getFileLabel(fileId).c_str(), "lpf");
  }
 
  canv->cd();
  canv->Clear();
  leg->Draw();
  canv->Print((SaveName).c_str());
 
  MakeParameterPlots(canv.get());
 
  MakeFluxPlots(canv.get());
 
  //KS: By default we don't run ProcessMCMC with PlotDet as this take some time, in case we did let's make fancy plots
  if(plotNDDet & (NDParameters > 0)) MakeNDDetPlots();
 
  canv->Print((SaveName+"]").c_str());
 
  MakeRidgePlots();
}

GetViolinPlots()

void GetViolinPlots

(

)

KS: Make fancy violin plots.

Definition at line 827 of file GetPostfitParamPlots.cpp.

{
  //KS: Should be in some config... either way it control whether you plot symmetric or asymmetric error bars
  bool PlotAssym = true;
    
  //KS: No idea why but ROOT changed treatment of violin in R6. If you have non uniform binning this will results in very hard to see violin plots.
  TCandle::SetScaledViolin(false);
 
  std::string OutputName = "";
  for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++){
    MACH3LOG_INFO("File {}: {} ", fileId, PlotMan->getFileName(fileId));
    OutputName += PlotMan->getFileName(fileId);
    OutputName = OutputName.substr(0, OutputName.find(".root"));
  }
  MACH3LOG_INFO("Making Violin Plot");
  OutputName += "_Violin";
  if(PlotAssym) OutputName += "_Assym";
 
  auto canvas = std::make_unique<TCanvas>("canv", "canv", 1024, 1024);
  canvas->SetGrid();
  gStyle->SetOptStat(0);
  //KS: Remove errors on X axis as they are confusing in violin type of plot
  if(!PlotAssym) gStyle->SetErrorX(0.0001);
  canvas->SetTickx();
  canvas->SetTicky();
  canvas->SetBottomMargin(0.25);
  canvas->SetTopMargin(0.08);
  canvas->SetRightMargin(0.03);
  canvas->SetLeftMargin(0.10);
  canvas->Print((OutputName+".pdf[").c_str());
  canvas->SetGrid();
 
  if(PlotMan->input().getFile(0).file->Get<TH2D>( "param_violin_prior" ) == nullptr)
  {
    MACH3LOG_WARN("Couldn't find violin plot, make sure method from MCMCProcessor is being called");
    return;
  }
  std::unique_ptr<TH2D> ViolinPre = M3::Clone(PlotMan->input().getFile(0).file->Get<TH2D>( "param_violin_prior" ));
  // Do some fancy replacements
  ViolinPre->SetFillColor(kRed);
  ViolinPre->SetFillColorAlpha(kRed, 0.35);
  ViolinPre->SetMarkerColor(kRed);
  ViolinPre->SetMarkerStyle(20);
  ViolinPre->SetMarkerSize(0.5);
 
  ViolinPre->GetYaxis()->SetTitleOffset(1.3);
  ViolinPre->GetYaxis()->SetTitle("Parameter Value");
  ViolinPre->GetXaxis()->LabelsOption("v");
 
  std::unique_ptr<TH1D> Postfit = M3::Clone(PlotMan->input().getFile(0).file->Get<TH1D>( ("param_xsec_"+plotType).c_str() ));
  Postfit->SetMarkerColor(kRed);
  Postfit->SetLineColor(kRed);
  Postfit->SetMarkerStyle(7);
 
  std::vector<std::unique_ptr<TH2D>> Violin(PlotMan->getNFiles());
  //KS: I know hardcoded but we can figure out later...
  const std::vector<Color_t> FillColors  = { kBlue, kGreen, kMagenta };
  for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++) {
    Violin[fileId] = M3::Clone(PlotMan->input().getFile(fileId).file->Get<TH2D>( "param_violin" ));
    if(Violin[fileId] == nullptr)
    {
      MACH3LOG_ERROR("Couldn't find violin plot, make sure method from MCMCProcessor is being called");
      return;
    }
    Violin[fileId]->SetMarkerColor(FillColors.at(fileId));
    Violin[fileId]->SetLineColor(FillColors.at(fileId));
    Violin[fileId]->SetFillColor(FillColors.at(fileId));
    Violin[fileId]->SetFillColorAlpha(FillColors.at(fileId), 0.35);
 
    if(fileId == 0){
      Violin[fileId]->SetMarkerStyle(20);
      Violin[fileId]->SetMarkerSize(0.5);
    }
  }
 
  std::unique_ptr<TGraphAsymmErrors> PostGraphAll = MakeTGraphAsymmErrors(PlotMan->input().getFile(0).file);
  // Make a Legend page
  auto leg = std::make_unique<TLegend>(0.0, 0.0, 1.0, 1.0);
  if (ViolinPre != nullptr) leg->AddEntry(ViolinPre.get(), "Prior", "lpf");
  for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++) {
    leg->AddEntry(Violin[fileId].get(), PlotMan->getFileLabel(fileId).c_str(), "lpf");
  }
  if(PlotAssym) leg->AddEntry(PostGraphAll.get(), "HPD Assym", "lp");
  else          leg->AddEntry(Postfit.get(), "HPD", "lpf");
 
  canvas->cd();
  canvas->Clear();
  leg->Draw();
  canvas->Print((OutputName+".pdf").c_str());
  
  // get the names of the blocks of parameters to group together
  std::vector<std::string> const blockNames = PlotMan->getOption<std::vector<std::string>>("paramGroups");
  const int nPlots = static_cast<int>(blockNames.size());
 
  for (int i = 0; i < nPlots; i++)
  {
    // get the configuration for this parameter
    std::string blockName = blockNames[i];
    YAML::Node paramBlock = PlotMan->getOption(blockName);
    std::string blockTitle                 = paramBlock[0].as<std::string>();
    std::vector<double>      blockLimits   = paramBlock[1].as<std::vector<double>>();
    std::vector<std::string> blockContents = paramBlock[2].as<std::vector<std::string>>();
 
    // get num of params in the block
    const int nParams = static_cast<int>(blockContents.size());
 
    // set some plot things
    auto blockHist_prefit = std::make_unique<TH2D>((blockName + "_Prefit").c_str(), blockTitle.c_str(), nParams, 0.0, static_cast<double>(nParams),
                                      ViolinPre->GetYaxis()->GetNbins(), ViolinPre->GetYaxis()->GetXmin(), ViolinPre->GetYaxis()->GetXmax());
    CopyViolinToBlock(ViolinPre.get(), blockHist_prefit.get(), blockContents);
    // set the y axis limits we got from config
    blockHist_prefit->GetYaxis()->SetRangeUser(blockLimits[0], blockLimits[1]);
 
    std::vector<std::unique_ptr<TH2D>> blockHist(PlotMan->getNFiles());
    for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++) {
      blockHist[fileId] = std::make_unique<TH2D>((blockTitle + "Violin" + fileId).Data(), (blockTitle + "Violin" + fileId).Data(),
                                                   nParams, 0.0, static_cast<double>(nParams), Violin[fileId]->GetYaxis()->GetNbins(),
                                                   Violin[fileId]->GetYaxis()->GetXmin(), Violin[fileId]->GetYaxis()->GetXmax());
      CopyViolinToBlock(Violin[fileId].get(), blockHist[fileId].get(), blockContents);
      blockHist[fileId]->GetYaxis()->SetRangeUser(blockLimits[fileId], blockLimits[1]);
    }
    // Do some fancy replacements
    PrettifyTitles(blockHist_prefit.get());
 
    // set some plot things
    auto blockHist_Best = std::make_unique<TH1D>(blockName.c_str(), blockTitle.c_str(),
                                                 nParams, 0.0, static_cast<double>(nParams));
    // set the errors for the prefit block hist
    for(int localBin=0; localBin < nParams; localBin ++){
      // the "local" bin is the params index within the group of parameters
      std::string paramName = blockContents[localBin];
      copyParToBlockHist(localBin, paramName, blockHist_Best.get(), "", 0);
    }
 
    std::vector<int> Index;
    for(unsigned int is = 0; is < blockContents.size(); is++) {
      int ParamBinId = M3::_BAD_INT_;
      for (int ix = 0; ix < ViolinPre->GetXaxis()->GetNbins(); ++ix) {
        if(ViolinPre->GetXaxis()->GetBinLabel(ix+1) == blockContents[is]) {
          ParamBinId = ix;
          break;
        }
      }
      Index.push_back(ParamBinId);
    }
    std::unique_ptr<TGraphAsymmErrors> PostGraph = MakeTGraphAsymmErrors(PlotMan->input().getFile(0).file, Index);
    PostGraph->SetMarkerColor(kBlack);
    PostGraph->SetLineColor(kBlack);
    PostGraph->SetMarkerStyle(7);
    PostGraph->SetLineWidth(2);
    PostGraph->SetLineStyle(kSolid);
 
    blockHist_prefit->Draw("violinX(03100300)");
    for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++) {
      blockHist[fileId]->Draw("violinX(03100300) SAME");
    }
 
    if(PlotAssym) PostGraph->Draw("P SAME");
    else Postfit->Draw("SAME");
    canvas->Print((OutputName+".pdf").c_str());
  }
  canvas->Print((OutputName+".pdf]").c_str());
}

InitializePads()

void InitializePads	(	const TCanvas *	canvas,
		TPad *&	pad3,
		TPad *&	pad4
	)

Definition at line 79 of file GetPostfitParamPlots.cpp.

                                                                     {
  // Initialize TPad p3
  pad3 = new TPad("Top", "Top", 0.0, 0.4, 1.0, 1.0);
  pad3->SetLeftMargin(canvas->GetLeftMargin());
  pad3->SetRightMargin(canvas->GetRightMargin());
  pad3->SetTopMargin(canvas->GetTopMargin());
  pad3->SetBottomMargin(0);
  pad3->SetGrid();
 
  // Initialize TPad p4
  pad4 = new TPad("Bottom", "Bottom", 0.0, 0.0, 1.0, 0.4);
  pad4->SetLeftMargin(canvas->GetLeftMargin());
  pad4->SetRightMargin(canvas->GetRightMargin());
  pad4->SetTopMargin(0);
  pad4->SetBottomMargin(0.75);
  pad4->SetGrid();
}

IsInvalidHist()

bool IsInvalidHist	(	const TH1D *	hist,
		double	invalid = M3::_BAD_DOUBLE_
	)

Definition at line 240 of file GetPostfitParamPlots.cpp.

{
  if (!hist) return true;
 
  const int nBins = hist->GetNbinsX();
 
  for (int i = 1; i <= nBins; i++) {
    double val = hist->GetBinContent(i);
 
    // If ANY bin is valid → histogram is usable
    if (val != invalid) {
      return false;
    }
  }
 
  // All bins are invalid
  return true;
}

main()

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 1091 of file GetPostfitParamPlots.cpp.

{
  SetMaCh3LoggerFormat();
  // Avoid Info in <TCanvas::Print>
  gErrorIgnoreLevel = kWarning;
 
  PlotMan = new MaCh3Plotting::PlottingManager();
  PlotMan->parseInputs(argc, argv);
  #ifdef MACH3_DEBUG
  PlotMan->input().getFile(0).file->ls();
  #endif
  PlotMan->setExec("GetPostfitParamPlots");
 
  PlotMan->style().setPalette(PlotMan->getOption<std::string>("colorPalette"));
 
  GetPostfitParamPlots();
  GetViolinPlots();
 
  if (PlotMan->input().getNInputFiles() == 2)
  {
    std::string filename1 = PlotMan->getFileName(0);
    std::string filename2 = PlotMan->getFileName(1);
    Get2DComparison(filename1, filename2);
  }
 
  if(PlotMan) delete PlotMan;
  return 0;
}

MakeFluxPlots()

void MakeFluxPlots

(

TCanvas *

canv

)

Definition at line 400 of file GetPostfitParamPlots.cpp.

{
  // these for non named params where we don't need as much space
  auto p1 = std::make_unique<TPad>("p1", "p1", 0.0, 0.3, 1.0, 1.0);
  auto p2 = std::make_unique<TPad>("p2", "p2", 0.0, 0.0, 1.0, 0.3);
  p1->SetLeftMargin(canv->GetLeftMargin());
  p1->SetRightMargin(canv->GetRightMargin());
  p1->SetTopMargin(canv->GetTopMargin());
  p1->SetBottomMargin(0);
  p1->SetGrid();
  p2->SetLeftMargin(canv->GetLeftMargin());
  p2->SetRightMargin(canv->GetRightMargin());
  p2->SetTopMargin(0);
  p2->SetBottomMargin(0.25);
  p2->SetGrid();
 
  p1->SetLogx(true);
  p2->SetLogx(true);
  
  // get the names of the blocks of parameters to group together
  std::vector<std::string> const fluxBlockNames = PlotMan->getOption<std::vector<std::string>>("fluxGroups");
  auto const fluxBinningTable = PlotMan->getOption("FluxBinning");
 
  const int FluxPlots = static_cast<int>(fluxBlockNames.size());
 
  for (int i = 0; i < FluxPlots; i++) 
  {
    // get the configuration for this block
    std::string fluxBlockName = fluxBlockNames[i];
    YAML::Node paramBlock           = PlotMan->getOption(fluxBlockName);
    std::string blockTitle          = paramBlock[0].as<std::string>();
    std::vector<double> blockLimits = paramBlock[1].as<std::vector<double>>();
    std::string blockBinningName    = paramBlock[2].as<std::string>();
    std::vector<int> blockContents  = paramBlock[3].as<std::vector<int>>();
 
    // get the binning for this block of flux params
    std::vector<double> binning    = fluxBinningTable[blockBinningName].as<std::vector<double>>();
 
    // get num of params in the block
    int nParams = blockContents[1] - blockContents[0] +1;
    // check for sanity
    if(nParams <= 0 || blockContents.size() > 2){
      MACH3LOG_CRITICAL("Invalid flux parameter block endpoints specified for {}", fluxBlockName);
      MACH3LOG_CRITICAL("  Should have the form [<low index>, <up index>]");
      throw MaCh3Exception(__FILE__ , __LINE__ );
    }
    if (nParams != static_cast<int>(binning.size()) - 1) {
      MACH3LOG_CRITICAL("Binning provided for flux param block {} does not match the number of parameters specified for the block", fluxBlockName);
      MACH3LOG_CRITICAL("  Provided {} parameters but {} bins", nParams, binning.size() -1);
      throw MaCh3Exception(__FILE__ , __LINE__ );
    }
 
    auto blockHist_prefit = std::make_unique<TH1D>(fluxBlockName.c_str(), blockTitle.c_str(), nParams, binning.data());
    blockHist_prefit->GetYaxis()->SetTitle("Parameter Variation");
    blockHist_prefit->GetXaxis()->SetTitle("E_{#nu} (GeV)");
    blockHist_prefit->GetXaxis()->SetTitleOffset(blockHist_prefit->GetXaxis()->GetTitleOffset()*1.2);
    PlotMan->style().setTH1Style(blockHist_prefit.get(), PlotMan->getOption<std::string>("prefitHistStyle"));
    // set the errors for the prefit block hist
    for(int fluxParId = blockContents[0]; fluxParId <= blockContents[1]; fluxParId++){
        int localBin = fluxParId - blockContents[0];
        std::string paramName = "b_" + std::to_string(fluxParId);
        copyParToBlockHist(localBin, paramName, blockHist_prefit.get(), "Prior", 0, false);
    }
 
    // now set for the postfit blocks for all files
    std::vector <std::unique_ptr<TH1D>> blockHist_postfit_Vec;
    for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++){
      auto blockHist_postfit = std::make_unique<TH1D>(fluxBlockName.c_str(), blockTitle.c_str(), nParams, binning.data());
 
      for(int fluxParId = blockContents[0]; fluxParId <= blockContents[1]; fluxParId++){
        int localBin = fluxParId - blockContents[0];
        std::string paramName = "b_" + std::to_string(fluxParId);
 
        copyParToBlockHist(localBin, paramName, blockHist_postfit.get(), "", fileId, false);
      }
      blockHist_postfit_Vec.push_back(std::move(blockHist_postfit));
    }
    // set the y axis limits we got from config
    blockHist_prefit->GetYaxis()->SetRangeUser(blockLimits[0], blockLimits[1]); 
    DrawPlots(canv, blockHist_prefit.get(), blockHist_postfit_Vec, p1.get(), p2.get(), SaveName);
  }
 
  canv->cd();
  canv->SetLogx(false);
  canv->SetBottomMargin(canv->GetBottomMargin()*1.7);
}

MakeNDDetPlots()

void MakeNDDetPlots

(

)

Warning

This is legacy functions and will become deprecated

Definition at line 488 of file GetPostfitParamPlots.cpp.

{
  MACH3LOG_INFO("ND detector parameters: {}", NDParameters);
  auto canv = std::make_unique<TCanvas>("canv", "canv", 1024, 1024);
  //gStyle->SetPalette(51);
  gStyle->SetOptStat(0); //Set 0 to disable statistic box
  canv->SetLeftMargin(0.12);
  canv->SetBottomMargin(0.12);
  canv->SetTopMargin(0.08);
  canv->SetRightMargin(0.04);
 
  // make a dummy TH1 to set out legend
  TH1D* Prefit = new TH1D();
  PlotMan->style().setTH1Style(Prefit, PlotMan->getOption<std::string>("prefitHistStyle"));
  Prefit->GetYaxis()->SetTitleOffset(Prefit->GetYaxis()->GetTitleOffset()*1.2);
 
  TPad* pTop = nullptr;
  TPad* pDown = nullptr;
  InitializePads(canv.get(), pTop, pDown);
 
  int NDbinCounter = NDParametersStartingPos;
  int Start = NDbinCounter;
  
  MACH3LOG_INFO("Running on {} samples", NDSamplesNames.size());
 
  for (unsigned int i = 0; i < NDSamplesNames.size(); ++i)
  {
    MACH3LOG_DEBUG("--- On sample {}", NDSamplesNames[i]); 
    NDbinCounter += NDSamplesBins[i];
 
    std::vector<std::unique_ptr<TH1D>> PostfitNDDetHistVec(PlotMan->getNFiles());
    TH1D *PreFitNDDetHist = PlotMan->input().getFile(0).file->Get<TH1D>(Form("param_%s_prefit", NDSamplesNames[i].c_str()));
    PlotMan->style().setTH1Style(PreFitNDDetHist, PlotMan->getOption<std::string>("prefitHistStyle"));
 
    std::string temp = NDSamplesNames[i].c_str();
    while (temp.find("_") != std::string::npos) {
       temp.replace(temp.find("_"), 1, std::string(" "));
     }
    PreFitNDDetHist->SetTitle(temp.c_str());
    PreFitNDDetHist->GetXaxis()->SetRangeUser(Start, NDbinCounter);
    
    MACH3LOG_DEBUG("  Start bin: {} :: End bin: {}", Start, NDbinCounter);
    // set the x range for the postfits
    for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++){
      PostfitNDDetHistVec[fileId] = M3::Clone(PlotMan->input().getFile(fileId).file->Get<TH1D>(Form("param_%s_%s", NDSamplesNames[i].c_str(), plotType.c_str())));
    }
 
    //KS: We don't' need name for every nd param
    for(int j = 0; j < NDSamplesBins[i]; ++j)
    {
      bool ProductOfTen = false;
      if(j % 10) ProductOfTen = true;
      if(j != 0 && ProductOfTen) PreFitNDDetHist->GetXaxis()->SetBinLabel(Start+j+1, " ");
      else{
        PreFitNDDetHist->GetXaxis()->SetBinLabel(Start+j+1, Form("Det Variation Bin %i", Start+j));
      }
    }
 
    PreFitNDDetHist->GetYaxis()->SetRangeUser(PlotMan->getOption<double>("detParYRange_low"), PlotMan->getOption<double>("detParYRange_high"));
    
    Start += NDSamplesBins[i];
 
    DrawPlots(canv.get(), PreFitNDDetHist, PostfitNDDetHistVec, pTop, pDown, SaveName);
    canv->Update();
  }
  delete pTop;
  delete pDown;
  delete Prefit;
}

MakeParameterPlots()

void MakeParameterPlots

(

TCanvas *

canv

)

Definition at line 338 of file GetPostfitParamPlots.cpp.

{  
  // get the names of the blocks of parameters to group together
  std::vector<std::string> const blockNames = PlotMan->getOption<std::vector<std::string>>("paramGroups");
  const int nPlots = static_cast<int>(blockNames.size());
 
  TPad *p3 = nullptr;
  TPad *p4 = nullptr;
  // these for named parameters where we need a nice big gap at the botto to fit the names
  InitializePads(canv, p3, p4);
 
  for (int i = 0; i < nPlots; i++)
  {
    // get the configuration for this parameter
    std::string blockName = blockNames[i];
    YAML::Node paramBlock = PlotMan->getOption(blockName);
    auto blockTitle       = paramBlock[0].as<std::string>();
    auto blockLimits      = paramBlock[1].as<std::vector<double>>();
    auto blockContents    = paramBlock[2].as<std::vector<std::string>>();
 
    // get num of params in the block
    const int nParams = static_cast<int>(blockContents.size());
 
    // set some plot things
    auto blockHist_prefit = std::make_unique<TH1D>(blockName.c_str(), blockTitle.c_str(),
                                                  nParams, 0.0, static_cast<double>(nParams));
    
    PlotMan->style().setTH1Style(blockHist_prefit.get(), PlotMan->getOption<std::string>("prefitHistStyle"));
 
    // set the errors for the prefit block hist
    for(int localBin=0; localBin < nParams; localBin ++){
      // the "local" bin is the params index within the group of parameters
      std::string paramName = blockContents[localBin];
      copyParToBlockHist(localBin, paramName, blockHist_prefit.get(), "Prior", 0);
    }
 
    // now set for the postfit blocks for all files
    std::vector <std::unique_ptr<TH1D>> blockHist_postfit_Vec;
    for(unsigned int fileId = 0; fileId < PlotMan->getNFiles(); fileId++) {
      auto blockHist_postfit = std::make_unique<TH1D>((blockName + PlotMan->getFileName(fileId)).c_str(),
                                                      blockTitle.c_str(), nParams, 0.0, static_cast<double>(nParams));
 
      // loop through all the parameters in this block and set the contents in the blocks TH1
      for(int localBin=0; localBin < nParams; localBin ++){
        // the "local" bin is the params index within the group of parameters
        std::string paramName = blockContents[localBin];
        copyParToBlockHist(localBin, paramName, blockHist_postfit.get(), "", fileId);
      }
      blockHist_postfit_Vec.push_back(std::move(blockHist_postfit));
    } 
    // set the y axis limits we got from config
    blockHist_prefit->GetYaxis()->SetRangeUser(blockLimits[0], blockLimits[1]); 
 
    // Do some fancy replacements
    PrettifyTitles(blockHist_prefit.get());
 
    DrawPlots(canv, blockHist_prefit.get(), blockHist_postfit_Vec, p3, p4, SaveName);
  }
  delete p3;
  delete p4;
}

makeRatio()

std::unique_ptr<TH1D> makeRatio	(	TH1D *	PrefitCopy,
		TH1D *	PostfitCopy,
		bool	setAxes
	)

Definition at line 172 of file GetPostfitParamPlots.cpp.

                                                                                 {
  // set up the ratio hist
  std::unique_ptr<TH1D> Ratio = M3::Clone(PrefitCopy);
  Ratio->GetYaxis()->SetTitle("(x_{Post}-#mu_{Prior})/#sigma_{Prior}");
  Ratio->SetMinimum(-3.7);
  Ratio->SetMaximum(3.7);    
 
  for (int j = 0; j < Ratio->GetXaxis()->GetNbins(); ++j) 
  {
    if ( PrefitCopy->GetBinError(j+1) > 1.e-5 )
    {
      Ratio->SetBinContent(j+1, (PostfitCopy->GetBinContent(j+1)-PrefitCopy->GetBinContent(j+1))/PrefitCopy->GetBinError(j+1));
 
      double up = (PostfitCopy->GetBinContent(j+1)+PostfitCopy->GetBinError(j+1)-PrefitCopy->GetBinContent(j+1))/PrefitCopy->GetBinError(j+1);
      double down = (PostfitCopy->GetBinContent(j+1)-PostfitCopy->GetBinError(j+1)-PrefitCopy->GetBinContent(j+1))/PrefitCopy->GetBinError(j+1);
 
      double maximum = up-Ratio->GetBinContent(j+1);
      double minimum = Ratio->GetBinContent(j+1)-down;
 
      Ratio->SetBinError(j+1, std::max(maximum, minimum));
    }
    //KS: Most likely flat prior
    else {
      Ratio->SetBinContent(j+1, (PostfitCopy->GetBinContent(j+1)-PrefitCopy->GetBinContent(j+1)));
 
      double up = (PostfitCopy->GetBinContent(j+1)+PostfitCopy->GetBinError(j+1)-PrefitCopy->GetBinContent(j+1));
      double down = (PostfitCopy->GetBinContent(j+1)-PostfitCopy->GetBinError(j+1)-PrefitCopy->GetBinContent(j+1));
 
      double maximum = up-Ratio->GetBinContent(j+1);
      double minimum = Ratio->GetBinContent(j+1)-down;
 
      Ratio->SetBinError(j+1, std::max(maximum, minimum));
    }
  } //end loop over parameters
 
  if(setAxes){
    Ratio->SetFillStyle(0);
    Ratio->SetFillColor(0);
 
    Ratio->SetLineColor(PostfitCopy->GetLineColor());
    if (Ratio->GetLineColor() == 0) Ratio->SetLineColor(kBlack);
    Ratio->SetMarkerColor(PostfitCopy->GetMarkerColor());
 
    Ratio->SetLineWidth(PlotMan->getOption<int>("plotLineWidth"));
    Ratio->SetTitle("");
 
    Ratio->SetMarkerSize(2);
    Ratio->SetMarkerStyle(20);
 
    Ratio->GetYaxis()->SetTitleSize(25);
    Ratio->GetYaxis()->SetTitleFont(43);
    Ratio->GetYaxis()->SetTitleOffset(2.0);
    Ratio->GetYaxis()->SetLabelFont(43);
    Ratio->GetYaxis()->SetLabelSize(25);
    Ratio->GetYaxis()->CenterTitle();
    Ratio->GetYaxis()->SetNdivisions(5,2,0);
 
    Ratio->GetXaxis()->SetTitleSize(25);
    Ratio->GetXaxis()->SetTitleFont(43);
    Ratio->GetXaxis()->SetTitleOffset(4.0);
    Ratio->GetXaxis()->SetLabelOffset(0.025);
    Ratio->GetXaxis()->SetLabelFont(43);
    Ratio->GetXaxis()->SetLabelSize(25);
  }
 
  return Ratio;
}

MakeRidgePlots()

void MakeRidgePlots

(

)

Definition at line 558 of file GetPostfitParamPlots.cpp.

{  
  gStyle->SetPalette(51);
 
  auto blankCanv = std::make_unique<TCanvas>("blankCanv", "blankCanv", 2048, 2048);
  blankCanv->SaveAs("RidgePlots.pdf[");
 
  // get the names of the blocks of parameters to group together
  const auto blockNames = PlotMan->getOption<std::vector<std::string>>("paramGroups");
  const int nPlots = static_cast<int>(blockNames.size());
 
  constexpr double padTopMargin = 0.9;
  constexpr double padBottomMargin = 0.1;
  constexpr double padOverlap = 0.9;
  constexpr double ridgeLineWidth = 1.0;
  for (int i = 0; i < nPlots; i++)
  {
    // get the configuration for this parameter
    std::string blockName = blockNames[i];
    auto const &paramBlock = PlotMan->getOption(blockName);
    auto blockTitle    = paramBlock[0].as<std::string>();
    auto blockLimits   = paramBlock[1].as<std::vector<double>>();
    auto blockContents = paramBlock[2].as<std::vector<std::string>>();
 
    // the directory of histograms
    TDirectoryFile *posteriorDir = PlotMan->input().getFile(0).file->Get<TDirectoryFile>("Post_1d_hists");
 
    // get num of params in the block
    int nParams = static_cast<int>(blockContents.size());
 
    if (nParams == 1) {
      MACH3LOG_WARN("{} doesn't work for single param", __func__);
      continue;
    }
    auto ridgeCanv = std::make_unique<TCanvas>("RidgePlotCanv", "RidgePlotCanv", 2048, 2048);
    ridgeCanv->Divide(1,1+nParams, 0.01, 0.0);
 
    auto title = std::make_unique<TLatex>();
    title->SetTextAlign(21);
    title->SetTextSize(0.03);
    title->DrawLatex(0.5, 0.95, blockTitle.c_str());
 
    auto label = std::make_unique<TLatex>();
    label->SetTextAlign(31);
    label->SetTextSize(0.02);
    
    auto line = std::make_unique<TLine>();
    line->SetLineColor(kBlack);
    line->SetLineWidth(ridgeLineWidth);
 
    // use this to set the limits and also to plot the x axis and grid
    auto axisPlot = std::make_unique<TH1D>("axis plot", "", 1, blockLimits[0], blockLimits[1]);
 
    std::vector<std::unique_ptr<TH1D>> axisPlot_holder(nParams);
    std::vector<std::unique_ptr<TPad>> graph_holder(nParams);
    for(int parId = 0; parId < nParams; parId++) {
      std::string paramName = blockContents[parId];
 
      TH1D *posteriorDist = nullptr;
      // get the list of objects in the directory
      TIter next(posteriorDir->GetListOfKeys());
      while (TKey* key = static_cast<TKey*>(next())) {
        // check if the end of the param name matches with the MaCh3 name, do this so we exclude things like nds_ at the start of the name
        std::string str(key->GetTitle());
        std::string name = PlotMan->input().translateName(0, MaCh3Plotting::kPostFit, paramName);
        uint pos = str.find(name);
        bool foundPar = (pos == str.length() - name.length());
 
        MACH3LOG_TRACE("Looking for {} in {}", name, str);
        if(foundPar){
          MACH3LOG_TRACE("Found it");
          posteriorDist = posteriorDir->Get<TH1D>(key->GetName());
        }
      }
 
      if(posteriorDist == nullptr){
        MACH3LOG_WARN("Couldn't find parameter {} when making ridgeline plots", paramName);
        MACH3LOG_WARN("It could be fixed param");
        continue;
      }
 
      // EM: do some funky scaling so that we always get evenly spaced pads in the range [bottomMargin, TopMargin] with the specified overlap
      double padAnchor = padBottomMargin + (static_cast<double>(nParams - parId - 1) /
                                  static_cast<double>(nParams - 1)) * (padTopMargin - padBottomMargin);
      double padWidth = (padTopMargin - padBottomMargin) / static_cast<double>(nParams);
      double norm = (padTopMargin - padBottomMargin);
 
      double padTop = padWidth * (1.0 + padOverlap) * (padTopMargin - padAnchor) / norm + padAnchor;
      double padBottom = padAnchor - padWidth * (1.0 + padOverlap) * (padAnchor - padBottomMargin) / norm;
 
      auto pad = std::make_unique<TPad>(paramName.c_str(), "", 0.3, padBottom, 0.9, padTop, -1, 0, -1);
      ridgeCanv->cd();
 
      pad->SetBottomMargin(0.0);
      pad->SetTopMargin(0.0);
      pad->SetLeftMargin(0.0);
      pad->SetRightMargin(0.0);
 
      pad->Draw();
      pad->cd();
      pad->SetFillStyle(4000);
 
      gPad->SetFrameFillStyle(4000);
      posteriorDist->GetFunction("Gauss")->SetBit(TF1::kNotDraw);
      posteriorDist->SetTitle("");
      posteriorDist->SetLineWidth(ridgeLineWidth);
      
      auto axisPlot_tmp = M3::Clone(axisPlot.get(), Form("AxisPlot_%s", paramName.c_str()));
      axisPlot_tmp->Draw("A");
      posteriorDist->Draw("H SAME");
    
      axisPlot_tmp->GetYaxis()->SetRangeUser(0.0, 0.7 *posteriorDist->GetMaximum());
      posteriorDist->SetLineColor(kWhite);
      posteriorDist->SetFillColorAlpha(TColor::GetColorPalette(floor(static_cast<float>(parId) *
                                          TColor::GetNumberOfColors() / static_cast<float>(nParams))), 0.85);
      
      posteriorDist->GetXaxis()->SetRangeUser(blockLimits[0], blockLimits[1]);
      posteriorDist->GetYaxis()->SetTitle(paramName.c_str());
      
      //EM: Have to get the frame drawn by the histogram and then set it to be transparent... it took me an hour to get rid of this one line on a plot
      gPad->Modified(); gPad->Update();
      TFrame *frame = gPad->GetFrame();
      frame->SetLineColorAlpha(0, 0.0);
      
      ridgeCanv->cd();
      label->DrawLatexNDC(0.29, padBottom + 0.005, PlotMan->style().prettifyParamName(paramName).c_str());
      line->DrawLine(0.1, padBottom, 0.9, padBottom);
 
      axisPlot_holder[parId] = std::move(axisPlot_tmp);
      graph_holder[parId] = std::move(pad);
    }
 
    ridgeCanv->cd();
    ridgeCanv->SetGrid(1,1);
    auto axisPad = std::make_unique<TPad>("AxisPad", "", 0.3, 0.0, 0.9, 1.0, -1, 0, -1);
    axisPad->SetLeftMargin(0.0);
    axisPad->SetRightMargin(0.0);
    axisPad->Draw();
    axisPad->cd();
    axisPad->SetGrid(1,1);
    axisPad->SetFrameFillStyle(4000);
    
    axisPlot->GetXaxis()->SetTickSize(0.01);
    axisPlot->GetXaxis()->SetTitle("Parameter Variation");
    axisPlot->GetYaxis()->SetLabelOffset(9999);
    axisPlot->GetYaxis()->SetLabelSize(0);
    axisPlot->GetYaxis()->SetTickSize(0);
    axisPlot->GetYaxis()->SetAxisColor(0,0.0);
    axisPlot->Draw("AXIS");
    axisPlot->Draw("AXIG SAME");
 
    axisPlot->SetFillStyle(4000);
    axisPad->SetFillStyle(4000);
    
    axisPad->SetGrid(1,1);
    gPad->Modified(); gPad->Update();
    gPad->SetFrameFillStyle(4000);
 
    gPad->Modified(); gPad->Update();
    TFrame *frame = gPad->GetFrame();
    frame->SetLineColorAlpha(0, 0.0);
 
    ridgeCanv->SaveAs("RidgePlots.pdf");
  }
  blankCanv->SaveAs("RidgePlots.pdf]");
}

MakeTGraphAsymmErrors()

std::unique_ptr<TGraphAsymmErrors> MakeTGraphAsymmErrors	(	const std::shared_ptr< TFile > &	File,
		std::vector< int >	Index = {}
	)

Definition at line 792 of file GetPostfitParamPlots.cpp.

                                                                                                                 {})
{
  int GraphBins = Index.size();
  std::vector<double> x(GraphBins);
  std::vector<double> y(GraphBins);
  std::vector<double> exl(GraphBins);
  std::vector<double> eyl(GraphBins);
  std::vector<double> exh(GraphBins);
  std::vector<double> eyh(GraphBins);
 
  TH1D* PostHist = static_cast<TH1D*>(File->Get( ("param_xsec_"+plotType).c_str() ));
 
  auto Errors_HPD_Positive = static_cast<TVectorD*>(File->Get( "Errors_HPD_Positive" ));
  auto Errors_HPD_Negative = static_cast<TVectorD*>(File->Get( "Errors_HPD_Negative" ));
  //KS: I am tempted to multithread this...
  for(int i = 0; i < GraphBins; ++i)
  {
    int Counter = Index.size() == 0 ? i : Index[i];
    //KS: We are extracting value from three object each having different numbering scheme, I have checked carefully so this is correct please don't change all these +1 +0.5 etc. it just work...
    x[i] = i + 0.5;
    y[i] = PostHist->GetBinContent(Counter+1);
 
    //KS: We don't want x axis errors as they are confusing in Violin plot
    exh[i] = 0.00001;
    exl[i] = 0.00001;
    eyh[i] = (*Errors_HPD_Positive)(Counter);
    eyl[i] = (*Errors_HPD_Negative)(Counter);
  }
  auto PostGraph = std::make_unique<TGraphAsymmErrors>(GraphBins, x.data(), y.data(), exl.data(), exh.data(), eyl.data(), eyh.data());
  PostGraph->SetTitle("");
 
  return PostGraph;
}

PrettifyTitles()

template<typename HistType >

void PrettifyTitles

(

HistType *

hist

)

Definition at line 132 of file GetPostfitParamPlots.cpp.

                                    {
  int nBins = hist->GetXaxis()->GetNbins();
  for(int i = 0; i < nBins; ++i) {
    std::string title = hist->GetXaxis()->GetBinLabel(i+1);
    title = PlotMan->style().prettifyParamName(title);
    hist->GetXaxis()->SetBinLabel(i+1, title.c_str());
  }
}

ReadSettings()

bool ReadSettings

(

const std::shared_ptr< TFile > &

File1

)

Definition at line 141 of file GetPostfitParamPlots.cpp.

{
  MACH3LOG_DEBUG("Reading settings for file {}", File1->GetName());
  #ifdef MACH3_DEBUG
  File1->ls();
  #endif
  TTree *Settings = (File1->Get<TTree>("Settings"));
 
  // can't find settings tree :(
  if (!Settings) return false;
 
  MACH3LOG_DEBUG("Got settings tree");
  M3::Utils::Print(Settings);
 
  Settings->SetBranchAddress("NDParameters", &NDParameters);
  Settings->SetBranchAddress("NDParametersStartingPos", &NDParametersStartingPos);
 
  std::vector<int> *NDSamples_Bins = 0;
  std::vector<std::string> *NDSamples_Names = 0;
  Settings->SetBranchAddress("NDSamplesNames", &NDSamples_Names);
  Settings->SetBranchAddress("NDSamplesBins", &NDSamples_Bins);
 
  Settings->GetEntry(0);
 
  NDSamplesNames = *NDSamples_Names;
  NDSamplesBins = *NDSamples_Bins;
 
  MACH3LOG_DEBUG("Read settings tree successfully");
  return true;
}

Variable Documentation

NDParameters

int NDParameters

Definition at line 53 of file GetPostfitParamPlots.cpp.

NDParametersStartingPos

int NDParametersStartingPos

Definition at line 54 of file GetPostfitParamPlots.cpp.

NDSamplesBins

std::vector<int> NDSamplesBins

Definition at line 56 of file GetPostfitParamPlots.cpp.

NDSamplesNames

std::vector<std::string> NDSamplesNames

Definition at line 57 of file GetPostfitParamPlots.cpp.

PlotMan

MaCh3Plotting::PlottingManager* PlotMan

Definition at line 51 of file GetPostfitParamPlots.cpp.

plotType

std::string plotType

Definition at line 60 of file GetPostfitParamPlots.cpp.

SaveName

std::string SaveName

Definition at line 59 of file GetPostfitParamPlots.cpp.